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Omni-DNA
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zhangtaolab/DNALLM
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DNALLM Documentation
zhangtaolab/DNALLM
Introduction
Getting Started
Getting Started
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User Guide
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Basenji2
Borzoi
DNABERT2
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GPN
LucaOne
megaDNA
MutBERT
Omni-DNA
Omni-DNA
Table of contents
omnidna
SPACE
Datahandling
Datahandling
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Biology
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DNA Sequences
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Transfer Learning
Fine-tuning Strategies
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Hyena Models
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Overview
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Multi-Label Classification
NER Fine-tuning
NER Data Generation
Custom Head
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LoRA Fine-tuning
LoRA Inference
Inference
Inference
Basic Inference
EVO Models
MegaDNA Models
Sequence Generation
tRNA Inference
Analysis
Analysis
Mutagenesis
Interpretation
Embedding
Benchmarking
Benchmarking
Benchmark
Data Preparation
Data Preparation
Fine-tuning Data
Prediction Data Preparation
MCP Examples
MCP Examples
DNALLM MCP Client with LangChain Agents
Pydantic AI with Ollama and MCP Server
Marimo Demos
Marimo Demos
Fine-tuning Demo
Inference Demo
Benchmark Demo
FAQ
FAQ
Overview
Installation
Models
Benchmark
Fine-tuning
Data Processing
CLI
Inference
MCP
Table of contents
omnidna
Omni-DNA
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dnallm.models.special.omnidna
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